.. _qiime2:

QIIME2
======

Basic info
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*       What is it?
*       `Official website <https://qiime2.org>`_
*       whatever...

Loading QIIME2
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1.      Request access to the bioinfo group.
2.      conda activate instructions


Henry2 specific documentation
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*	`Moving Picture Tutorial on Henry2 <https://docs.google.com/document/d/1ConYvYvh995c6ZTxzYKDS-OrE_IL_M8verHTwgtMSBA>`_
*	`Metagenomics class exercise <https://docs.google.com/document/d/1Ql5aqWh-mc0VSv8z3v-LhMOC8OTwP_RIQN-RCNq1MOE>`_
*	`Scaling tests to inform job submission scripts <https://docs.google.com/spreadsheets/d/1oHuZnh3cgbrRaggBgq0dLJrKCAnjR68Yz8EgV3PqxgY>`_
*       `YouTube tutorial on the Metagenomics class exercise, by Carlos Goller <https://youtu.be/j3SfvqSjVCk>`_


Details about running parallel jobs 
***********************************

*       See the `Software Spreadsheet <https://docs.google.com/spreadsheets/d/1L6tQfqHJ1sBqRgmHsjx1u7Ox02WOIY65fpNg2wNHsRQ/edit#gid=1265097099>`_ for information about finding threaded functions.

sub heading 4
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	- dash
	- list